Coronary Flow and Perfusion Modelling

Sinclair, M.; Lee, J.; Schuster, A.; Chiribiri, A.; van den Wijngaard, J.; van Horssen, P.; Siebes, M.; Spaan, Jos A E.; Nagel, E. & Smith, Nicolas P. Microsphere skimming in the porcine coronary arteries: Implications for flow quantification
Microvascular Research, 2015, 100, 59-70 

Sinclair, M.; Lee, J.; Cookson, Andrew N.; Rivolo, S.; Hyde, Eoin R. & Smith, Nicolas P.
Measurement and modeling of coronary blood flow
Wiley interdisciplinary reviews. Systems biology and medicine, 2015, DOI: 10.1002/wsbm.1309

Lee, J.; Cookson, A.; Chabiniok, R.; Rivolo, S.; Hyde, E.; Sinclair, M.; Michler, C.; Sochi, T. & Smith, N.
Multiscale Modelling of Cardiac Perfusion
Modeling the Heart and the Circulatory System, Springer, 2015

Cookson, A.; Lee, J.; Michler, C.; Chabiniok, R.; Hyde, E.; Nordsletten, D. & Smith, N.
A spatially-distributed computational model to quantify behaviour of contrast agents in MR perfusion imaging
Medical image analysis, 2014, 18, 1200-1216

Smith, Amy F.; Shipley, Rebecca J.; Lee, J.; Sands, Gregory B.; LeGrice, Ian J. & Smith, Nicolas P.
Transmural Variation and Anisotropy of Microvascular Flow Conductivity in the Rat Myocardium
Annals of Biomedical Engineering, 2014, 42, 1966-1977 

Rivolo, S.; Nagel, E.; Smith, Nicolas P. & Lee, J.
Automatic selection of optimal Savitzky-Golay filter parameters for Coronary Wave Intensity Analysis
Engineering in Medicine and Biology Society (EMBC), 2014 36th Annual International Conference of the IEEE, IEEE, 2014, 5056-5059

Hyde, Eoin R.; Cookson, Andrew N.; Lee, J.; Michler, C.; Goyal, A.; Sochi, T.; Chabiniok, R.; Sinclair, M.; Nordsletten, David A.; Spaan, J.; van den Wijngaard, Jeroen P H M.; Siebes, M. & Smith, Nicolas P.
Multi-Scale Parameterisation of a Myocardial Perfusion Model Using Whole-Organ Arterial Networks
Annals of Biomedical Engineering, 2014, 42, 797-811

Rivolo, S.; Asrress, Kaleab N.; Chiribiri, A.; Sammut, E.; Wesolowski, R.; Bloch, Lars; Grondal, Anne K.; Honge, J.; Kim, Won Yong.; Marber, M.; Redwood, S.; Nagel, E.; Smith, N. & Lee, J.
Enhancing coronary Wave Intensity Analysis robustness by high order central finite differences
Artery Research, 2014, 8, 98-109

Hyde, Eoin R.; Michler, C.; Lee, J.; Cookson, Andrew N.; Chabiniok, R.; Nordsletten, David A. & Smith, Nicolas P.
Parameterisation of multi-scale continuum perfusion models from discrete vascular networks
Medical and Biological Engineering and Computing, 2013, 51, 557-570

Michler, C.; Cookson, A. N.; Chabiniok, R.; Hyde, E.; Lee, J.; Sinclair, M.; Sochi, T.; Goyal, A.; Vigueras, G.; Nordsletten, D. A.. & Smith, N. P.. A computationally efficient framework for the simulation of cardiac perfusion using a multi-compartment Darcy porous-media flow model
International Journal For Numerical Methods In Biomedical Engineering, 2013, 29, 217-232

Goyal, A.; Lee, J.; Lamata de la Orden, P.; van den Wijngaard, J.; van Horssen, P.; Spaan, J.; Siebes, M.; Grau, V. & Smith, N.
Model-based Vasculature Extraction from Optical Fluorescence Cryomicrotome Images
IEEE Transactions on Medical Imaging, 2012, 32, 56-72

Lee, J. & Smith, Nicolas P.
The Multi-Scale Modelling of Coronary Blood Flow
Annals of Biomedical Engineering, 2012, 40, 2399-2413

Fry, Brendan C.; Lee, J.; Smith, Nicolas P. & Secomb, Timothy W.
Estimation of Blood Flow Rates in Large Microvascular Networks
Microcirculation, 2012, 19, 530-538 

Cookson, A. N.; Lee, J.; Michler, C.; Chabiniok, R.; Hyde, E.; Nordsletten, D. A.; Sinclair, M.; Siebes, M. & Smith, N. P.
A novel porous mechanical framework for modelling the interaction between coronary perfusion and myocardial mechanics, Journal of Biomechanics, 2012, 45, 850 - 855 


Myocardial Mechanics

Asner, L.; Hadjicharalambous, M.; Lee, J. & Nordsletten, D.
STACOM challenge: Simulating left ventricular mechanics in the canine heart
Statistical Atlases and Computational Models of the Heart - Imaging and Modelling Challenges, 2015, 123-134

Hadjicharalambous, M.; Chabiniok, R.; Asner, L.; Sammut, E.; Wong, J.; Carr-White, G.; Lee, J.; Razavi, R.; Smith, N. & Nordsletten, D. Analysis of passive cardiac constitutive laws for parameter estimation using 3D tagged MRI
Biomechanics and Modeling in Mechanobiology, 2015

Hadjicharalambous, M.; Lee, J.; Smith, Nicolas P.. & Nordsletten, David A..
A displacement-based finite element formulation for incompressible and nearly-incompressible cardiac mechanics
Computer Methods in Applied Mechanics and Engineering, 2014, 274, 213-236

Vigueras, G.; Roy, I.; Cookson, A.; Lee, J.; Smith, N. & Nordsletten, D.
Toward GPGPU accelerated human electromechanical cardiac simulations
International Journal For Numerical Methods In Biomedical Engineering, 30, 117-137